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tdbR00000117

NameValue
Coding AA: Gly
Anticodon sequence: CCC
Organism: Escherichia coli NCBI:txid562
RNA type: cytoplasmic
Sequence: GCGGGCG4AGUUCAAUGGDAGAACGAGAGCUUCCCAAGCUCUAUACGAGGGTPCGAUUCCCUUCGCCCGCUCCA
Unmodified sequence: GCGGGCGUAGUUCAAUGGUAGAACGAGAGCUUCCCAAGCUCUAUACGAGGGUUCGAUUCCCUUCGCCCGCUCCA
Secondary structure: (((((((..((((.......)))).(((((.......)))))....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:		 Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: June 29, 2026
Folding free energy [kcal/mol]: -28.10
Pre-aligned sequence:
Pre-aligned secondary structure:		 -GCGGGCG4AGUUCAAU--GGD--AGAACGAGAGCUUCCCAAGCUCUAU-------------------A-CGAGGGTPCGAUUCCCUUCGCCCGCUCCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • The nucleotide sequence of the GGG-specific glycine transfer ribonucleic acid of Escherichia coli and of Salmonella typhimurium.
    C W Hill, G Combriato, W Steinhart, D L Riddle, J Carbon
    The Journal of biological chemistry
    volume: 248 issue: 12 date: June 25, 1973 PUBMED ID: 4576134
Comments: 8 PROBABLY MODIFIED

Aminoacylation

NameValue
Positive identity elements regulating aminoacylation: U73; G1-C72; C2-G71; G3-C70; C35; C36
Negative identity elements antideterminants of aminoacylation: NA
Citation: Nameki,N., Tamura,K., Asahara,H. and Hasegawa,T. (1997) Recognition of tRNAGly by three widely diverged glycyl-tRNA synthetases. J. Mol. Biol., 268, 640–647.
DOI: 10.1006/jmbi.1997.0993
PMID: 9171287

Secondary structure

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Tertiary structure

Model based on:
Moderna
RNA Composer