tdbR00000118
| Name | Value |
|---|---|
| Coding AA: | Gly |
| Anticodon sequence: | GCC |
| Organism: | Escherichia coli NCBI:txid562 |
| RNA type: | cytoplasmic |
| Sequence: | GCGGGAAUAGCUCAGDDGGDAGAGCACGACCUUGCCAAGGUCGGG7UCGCGAGTPCGAGUCUCGUUUCCCGCUCCA |
| Unmodified sequence: | GCGGGAAUAGCUCAGUUGGUAGAGCACGACCUUGCCAAGGUCGGGGUCGCGAGUUCGAGUCUCGUUUCCCGCUCCA |
| Secondary structure: | (((((((..((((........)))).(((((.......))))).....(((((.......)))))))))))).... |
| Homology model or structure extracted from PDB: |
Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025) |
| Prepared by: | Database creators |
| Version: | 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: June 29, 2026 |
| Folding free energy [kcal/mol]: | -28.90 |
| Pre-aligned sequence: Pre-aligned secondary structure: |
-GCGGGAAUAGCUCAGDD-GGD--AGAGCACGACCUUGCCAAGGUCGGG-------------------7UCGCGAGTPCGAGUCUCGUUUCCCGCUCCA .(((((((..((((...........)))).(((((.......)))))........................(((((.......)))))))))))).... |
| Publications: |
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Aminoacylation
| Name | Value |
|---|---|
| Positive identity elements regulating aminoacylation: | U73; G1-C72; C2-G71; G3-C70; C35; C36 |
| Negative identity elements antideterminants of aminoacylation: | NA |
| Citation: | Nameki,N., Tamura,K., Asahara,H. and Hasegawa,T. (1997) Recognition of tRNAGly by three widely diverged glycyl-tRNA synthetases. J. Mol. Biol., 268, 640–647. |
| DOI: | 10.1006/jmbi.1997.0993 |
| PMID: | 9171287 |
Secondary structure
Tertiary structure
Model based on: