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tdbR00000140

NameValue
Coding AA: His
Anticodon sequence: QUG
Organism: Escherichia coli NCBI:txid562
RNA type: cytoplasmic
Sequence: GGUGGCUA4AGCUCAGDDGGDAGAGCCCUGGAUUQUG/PPCCAGUU7UCGUGGGTPCGAAUCCCAUUAGCCACCCCA
Unmodified sequence: GGUGGCUAUAGCUCAGUUGGUAGAGCCCUGGAUUGUGAUUCCAGUUGUCGUGGGUUCGAAUCCCAUUAGCCACCCCA
Secondary structure: .(((((((..((((........)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:		 Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: June 29, 2026
Folding free energy [kcal/mol]: -26.80
Pre-aligned sequence:
Pre-aligned secondary structure:		 GGUGGCUA4AGCUCAGDD-GGD--AGAGCCCUGGAUUQUG/PPCCAGUU-------------------7UCGUGGGTPCGAAUCCCAUUAGCCACCCCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Histidine regulation in Salmonella typhimurium. 13. Nucleotide sequence of histidine transfer ribonucleic acid.
    C E Singer, G R Smith
    The Journal of biological chemistry
    volume: 247 issue: 10 date: May 25, 1972 PUBMED ID: 4337503

Aminoacylation

NameValue
Positive identity elements regulating aminoacylation: G-1; C73; G34; U35; G36
Negative identity elements antideterminants of aminoacylation: NA
Citation: Tian,Q., Wang,C., Liu,Y. and Xie,W. (2015) Structural basis for recognition of G-1-containing tRNA by histidyl-tRNA synthetase. Nucleic Acids Res., 43, 2980–2990.
DOI: 10.1093/nar/gkv129
PMID: 25722375

Secondary structure

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Tertiary structure

Model based on:
Moderna
RNA Composer