tdbR00000595

Name	Value
Coding AA:	Leu
Anticodon sequence:	BAA
Organism:	Escherichia coli NCBI:txid562
RNA type:	cytoplasmic
Sequence:	GCCGAAG4GGCGAAADC#GDAGACACAGUUGAPUBAA*APCAACCGUAGAAAUACGUGCCGGTPCGAGUCCGGCCUUCGGCACCA
Unmodified sequence:	GCCGAAGUGGCGAAAUCGGUAGACACAGUUGAUUCAAAAUCAACCGUAGAAAUACGUGCCGGUUCGAGUCCGGCCUUCGGCACCA
Secondary structure:	(((((((..(.(...........).).(((((.......))))).............(((((.......))))))))))))....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-19.30
Pre-aligned sequence: Pre-aligned secondary structure:	-GCCGAAG4GGCGAAADC-#GDA-GACACAGUUGAPUBAA*APCAACC-GUA----GAAA-----UACG-UGCCGGTPCGAGUCCGGCCUUCGGCACCA .(((((((..(.(.............).).(((((.......)))))........................(((((.......))))))))))))....
Publications:	Modified nucleosides in the first positions of the anticodons of tRNA(Leu)4 and tRNA(Leu)5 from Escherichia coli. N Horie, Z Yamaizumi, Y Kuchino, K Takai, E Goldman, T Miyazawa, S Nishimura, S Yokoyama Biochemistry volume: 38 issue: 1 date: Jan. 5, 1999 PUBMED ID: 9890900

Model based on:

Moderna

RNA Composer