tdbR00000595

NameValue
Coding AA: Leu
Anticodon sequence: BAA
Organism: Escherichia coli NCBI:txid562
RNA type: cytoplasmic
Sequence: GCCGAAG4GGCGAAADC#GDAGACACAGUUGAPUBAA*APCAACCGUAGAAAUACGUGCCGGTPCGAGUCCGGCCUUCGGCACCA
Unmodified sequence: GCCGAAGUGGCGAAAUCGGUAGACACAGUUGAUUCAAAAUCAACCGUAGAAAUACGUGCCGGUUCGAGUCCGGCCUUCGGCACCA
Secondary structure: (((((((..(.(...........).).(((((.......))))).............(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -19.30
Pre-aligned sequence:
Pre-aligned secondary structure:
-GCCGAAG4GGCGAAADC-#GDA-GACACAGUUGAPUBAA*APCAACC-GUA----GAAA-----UACG-UGCCGGTPCGAGUCCGGCCUUCGGCACCA
.(((((((..(.(.............).).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Modified nucleosides in the first positions of the anticodons of tRNA(Leu)4 and tRNA(Leu)5 from Escherichia coli.
    N Horie, Z Yamaizumi, Y Kuchino, K Takai, E Goldman, T Miyazawa, S Nishimura, S Yokoyama
    Biochemistry
    volume: 38 issue: 1 date: Jan. 5, 1999 PUBMED ID: 9890900
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