tdbR00000276
| Name | Value |
|---|---|
| Coding AA: | Met |
| Anticodon sequence: | MAU |
| Organism: | Escherichia coli NCBI:txid562 |
| RNA type: | cytoplasmic |
| Sequence: | GGCUACG4AGCUCAGDD#GDDAGAGCACAUCACUMAU6APGAUGGG7XCACAGGTPCGAAUCCCGUCGUAGCCACCA |
| Unmodified sequence: | GGCUACGUAGCUCAGUUGGUUAGAGCACAUCACUCAUAAUGAUGGGGUCACAGGUUCGAAUCCCGUCGUAGCCACCA |
| Secondary structure: | (((((((..((((.........)))).(((((.......))))).....((.((.......)).))))))))).... |
| Homology model or structure extracted from PDB: |
Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025) |
| Prepared by: | Database creators |
| Version: | 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: June 29, 2026 |
| Folding free energy [kcal/mol]: | -20.00 |
| Pre-aligned sequence: Pre-aligned secondary structure: |
-GGCUACG4AGCUCAGDD-#GDD-AGAGCACAUCACUMAU6APGAUGGG-------------------7XCACAGGTPCGAAUCCCGUCGUAGCCACCA .(((((((..((((...........)))).(((((.......)))))........................((.((.......)).))))))))).... |
| Publications: |
|
| Comments: | 16 PARTIALLY U ; 18 PARTIALLY G |
Aminoacylation
| Name | Value |
|---|---|
| Positive identity elements regulating aminoacylation: | A73; C34; A35; U36; initiator-specific elements include C32, U33, A37 and acceptor-stem features in some assays |
| Negative identity elements antideterminants of aminoacylation: | NA |
| Citation: | Pak,M., Pallanck,L. and Schulman,L.H. (1992) Conversion of a methionine initiator tRNA into a tryptophan-inserting elongator tRNA in vivo. Biochemistry, 31, 3303–3309. |
| DOI: | 10.1021/bi00128a001 |
| PMID: | 1554714 |
Secondary structure
Tertiary structure
Model based on: