tdbR00000623

NameValue
Coding AA: Pro
Anticodon sequence: CGG
Organism: Escherichia coli NCBI:txid562
RNA type: cytoplasmic
Sequence: CGGUGAU4GGCGCAGCCUGGDAGCGCACUUCGJUCGGKACGAAGGG7UCGGAGGTPCGAAUCCUCUAUCACCGACCA
Unmodified sequence: CGGUGAUUGGCGCAGCCUGGUAGCGCACUUCGUUCGGGACGAAGGGGUCGGAGGUUCGAAUCCUCUAUCACCGACCA
Secondary structure: (((((((..((((.........)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -24.90
Pre-aligned sequence:
Pre-aligned secondary structure:
-CGGUGAU4GGCGCAGCCUGGD--AGCGCACUUCGJUCGGKACGAAGGG-------------------7UCGGAGGTPCGAAUCCUCUAUCACCGACCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Escherichia coli proline tRNA: structure and recognition sites for prolyl-tRNA synthetase.
    T Hasegawa, T Yokogawa
    Nucleic acids symposium series
    issue: 44 PUBMED ID: 12903242
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