tdbR00000568 (deprecated)

NameValue
Coding AA: Sec
Anticodon sequence: UCA
Organism: Escherichia coli NCBI:txid562
RNA type: cytoplasmic
Sequence: GGAAGAUCGUCGUCUCCGGDGAGGCGGCUGGACUUCA+AUCCAGUUGGGGCCGCAAGCGGUCCCGGGCAGGTPCGACUCCUGUGAUCUUCCGCCA
Unmodified sequence: GGAAGAUCGUCGUCUCCGGUGAGGCGGCUGGACUUCAAAUCCAGUUGGGGCCGCAAGCGGUCCCGGGCAGGUUCGACUCCUGUGAUCUUCCGCCA
Secondary structure: .((((((..((((........))))((((((.......))))))....................(((((.......))))))))))).....
Homology model or
structure extracted from PDB:		 Model (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 22, 2019
Folding free energy [kcal/mol]: 100000.00
Pre-aligned sequence:
Pre-aligned secondary structure:		 -_AAGAUCGUCGUCUCC--GGDG-AGGCGGCUGGACUUCA+AUCCAGU-UGGGGCCGC_GCGGUCCCG--GGCAGGTPCGACUCCUGUGAUCUU_GCCA
..((((((..((((...........))))((((((.......)))))).......................(((((.......))))))))))).....
Publications:
  • The selenocysteine-inserting opal suppressor serine tRNA from E. coli is highly unusual in structure and modification.
    A Schön, A Böck, G Ott, M Sprinzl, D Söll
    Nucleic acids research
    volume: 17 issue: 18 date: Sept. 25, 1989 PUBMED ID: 2529478
Next entry: tdbR00000568 (Sept. 23, 2019, 3:13 p.m.)
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