tdbR00000390

NameValue
Coding AA: Ser
Anticodon sequence: CGA
Organism: Escherichia coli NCBI:txid562
RNA type: cytoplasmic
Sequence: GGAGAGAUGCCGGAGC#GCDGAACGGACCGGUCUCGA*AACCGGAGUAGGGGCAACUCUACCGGGGGTPCAAAUCCCCCUCUCUCCGCCA
Unmodified sequence: GGAGAGAUGCCGGAGCGGCUGAACGGACCGGUCUCGAAAACCGGAGUAGGGGCAACUCUACCGGGGGUUCAAAUCCCCCUCUCUCCGCCA
Secondary structure: (((((((..(((...........))).(((((.......)))))..................(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -30.60
Pre-aligned sequence:
Pre-aligned secondary structure:
-GGAGAGAUGCCGGAGC--#GCDGAACGGACCGGUCUCGA*AACCGGA-GUAGGG-GCAA--CUCUAC--CGGGGGTPCAAAUCCCCCUCUCUCCGCCA
.(((((((..(((.............))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • A nucleotide change in the anticodon of an Escherichia coli serine transfer RNA results in supD-amber suppression.
    D A Steege
    Nucleic acids research
    volume: 11 issue: 11 date: June 11, 1983 PUBMED ID: 6344015
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