tdbR00000393

NameValue
Coding AA: Ser
Anticodon sequence: GGA
Organism: Escherichia coli NCBI:txid562
RNA type: cytoplasmic
Sequence: GGUGAGG4GUCCGAGU#GDDGAAGGAGCACGCCUGGAAAGPGUGUAUACGGCAACGUAUCGGGGGTPCGAAUCCCCCCCUCACCGCCA
Unmodified sequence: GGUGAGGUGUCCGAGUGGUUGAAGGAGCACGCCUGGAAAGUGUGUAUACGGCAACGUAUCGGGGGUUCGAAUCCCCCCCUCACCGCCA
Secondary structure: (((((((..(((...........)))((((((.......))))))...............(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -30.20
Pre-aligned sequence:
Pre-aligned secondary structure:
-GGUGAGG4GUCCGAGU--#GDDGAAGGAGCACGCCUGGAAAGPGUGU-AUACG--GCAA---CGUAU--CGGGGGTPCGAAUCCCCCCCUCACCGCCA
.(((((((..(((.............)))((((((.......)))))).......................(((((.......))))))))))))....
Publications:
  • Nucleotide sequences of two serine tRNAs with a GGA anticodon: the structure-function relationships in the serine family of E. coli tRNAs.
    H Grosjean, K Nicoghosian, E Haumont, D Söll, R Cedergren
    Nucleic acids research
    volume: 13 issue: 15 date: Aug. 12, 1985 PUBMED ID: 3898020
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