tdbR00000393

Name	Value
Coding AA:	Ser
Anticodon sequence:	GGA
Organism:	Escherichia coli NCBI:txid562
RNA type:	cytoplasmic
Sequence:	GGUGAGG4GUCCGAGU#GDDGAAGGAGCACGCCUGGAAAGPGUGUAUACGGCAACGUAUCGGGGGTPCGAAUCCCCCCCUCACCGCCA
Unmodified sequence:	GGUGAGGUGUCCGAGUGGUUGAAGGAGCACGCCUGGAAAGUGUGUAUACGGCAACGUAUCGGGGGUUCGAAUCCCCCCCUCACCGCCA
Secondary structure:	(((((((..(((...........)))((((((.......))))))...............(((((.......))))))))))))....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-30.20
Pre-aligned sequence: Pre-aligned secondary structure:	-GGUGAGG4GUCCGAGU--#GDDGAAGGAGCACGCCUGGAAAGPGUGU-AUACG--GCAA---CGUAU--CGGGGGTPCGAAUCCCCCCCUCACCGCCA .(((((((..(((.............)))((((((.......)))))).......................(((((.......))))))))))))....
Publications:	Nucleotide sequences of two serine tRNAs with a GGA anticodon: the structure-function relationships in the serine family of E. coli tRNAs. H Grosjean, K Nicoghosian, E Haumont, D Söll, R Cedergren Nucleic acids research volume: 13 issue: 15 date: Aug. 12, 1985 PUBMED ID: 3898020

Model based on:

Moderna

RNA Composer