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tdbR00000546

NameValue
Coding AA: Tyr
Anticodon sequence: QUA
Organism: Escherichia coli NCBI:txid562
RNA type: cytoplasmic
Sequence: GGUGGGG4UCCCGAGC#GCCAAAGGGAGCAGACUQUA*APCUGCCGUCACAGACUUCGAAGGTPCGAAUCCUUCCCCCACCACCA
Unmodified sequence: GGUGGGGUUCCCGAGCGGCCAAAGGGAGCAGACUGUAAAUCUGCCGUCACAGACUUCGAAGGUUCGAAUCCUUCCCCCACCACCA
Secondary structure: (((((((..(((...........))).(((((.......))))).............(((((.......))))))))))))....
Homology model or
structure extracted from PDB:		 Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: June 29, 2026
Folding free energy [kcal/mol]: -28.80
Pre-aligned sequence:
Pre-aligned secondary structure:		 -GGUGGGG4UCCCGAGC--#GCCAAAGGGAGCAGACUQUA*APCUGCC-GUC----ACA------GACUUCGAAGGTPCGAAUCCUUCCCCCACCACCA
.(((((((..(((.............))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • The nucleotide sequences of tyrosine transfer RNAs of Escherichia coli.
    H M Goodman, J N Abelson, A Landy, S Zadrazil, J D Smith
    European journal of biochemistry
    volume: 13 issue: 3 PUBMED ID: 4315419

Aminoacylation

NameValue
Positive identity elements regulating aminoacylation: A73; G1-C72; G34; U35
Negative identity elements antideterminants of aminoacylation: NA
Citation: Bonnefond,L., Gieg´e,R. and Rudinger-Thirion,J. (2005) Evolution of the tRNATyr/TyrRS aminoacylation systems. Biochimie, 87, 873–883.
DOI: 10.1016/j.biochi.2005.03.008
PMID: 16164994

Secondary structure

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Tertiary structure

Model based on:
Moderna
RNA Composer