tdbR00000534

NameValue
Coding AA: Ini
Anticodon sequence: CAU
Organism: Euphausia superba NCBI:txid6819
RNA type: cytoplasmic
Sequence: AGCAGAGUKLCGCAGUGGAAGCGULCUGGGCCCAU6ACCCAGAG7UCGGUAGAPCG"AACUACUCUCUGCUACCA
Unmodified sequence: AGCAGAGUGGCGCAGUGGAAGCGUGCUGGGCCCAUAACCCAGAGGUCGGUAGAUCGAAACUACUCUCUGCUACCA
Secondary structure: (((((((..((((.......)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -23.60
Pre-aligned sequence:
Pre-aligned secondary structure:
-AGCAGAGUKLCGCAGU--GGA--AGCGULCUGGGCCCAU6ACCCAGAG-------------------7UCGGUAGAPCG"AACUACUCUCUGCUACCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Chemical structure and thermal properties of initiator tRNA from Euphausia sperba in comparison with those of other eucaryotic initiator tRNAs.
    K Watanabe, K Asai, T Oshima, Y Kuchino
    Journal of biochemistry
    volume: 90 issue: 5 PUBMED ID: 7040353
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