tdbR00000430

NameValue
Coding AA: Thr
Anticodon sequence: GGU
Organism: Halobacterium salinarum NCBI:txid2242
RNA type: cytoplasmic
Sequence: GCCUGGGUAGCUPAGCGGUAAAGCRCGUCCUUGGU6AGGACGAGACC??GGA]PBOAAUUCCGGCCUAGGCUCCA
Unmodified sequence: GCCUGGGUAGCUUAGCGGUAAAGCGCGUCCUUGGUAAGGACGAGACCCCGGAUUCAAAUUCCGGCCUAGGCUCCA
Secondary structure: (((((((..((((.......)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -28.00
Pre-aligned sequence:
Pre-aligned secondary structure:
-GCCUGGGUAGCUPAGC--GGU--AAAGCRCGUCCUUGGU6AGGACGAG-------------------ACC??GGA]PBOAAUUCCGGCCUAGGCUCCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Halobacterium cutirubrum tRNA sequences
    K.Nicoghosian, Xiang-Rong Gu, Robert Cedergren
    FEBS letters
    volume: 193 issue: 2 date: Jan. 1, 1985 PUBMED ID: - DOI: https://doi.org/10.1016/0014-5793(85)80164-2
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