tdbR00000127

NameValue
Coding AA: Gly
Anticodon sequence: UCU
Organism: Halocynthia roretzi NCBI:txid7729
RNA type: mitochondrial
Sequence: GCUGUGUU"GUAUAAAGUAAUAPAPGUGAPUUCUAAPCAUGGGAUCCUUUAGGGACGUAGUACCA
Unmodified sequence: GCUGUGUUAGUAUAAAGUAAUAUAUGUGAUUUCUAAUCAUGGGAUCCUUUAGGGACGUAGUACCA
Secondary structure: (((((((..((((......)))).(((((.......)))))...((((..)))))))))))....
Homology model or
structure extracted from PDB:		 Model (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: 99991.50
Pre-aligned sequence:
Pre-aligned secondary structure:		 -GCUGUGUU"GUAUAAA--GU---AAUAPAPGUGAPUUCUAAPCAUGGG---------------------AUCCUU-------UAGGGACGUAGUACCA
.(((((((..((((...........)))).(((((.......)))))........................((((.........)))))))))))....
Publications:
  • An extra tRNAGly(U*CU) found in ascidian mitochondria responsible for decoding non-universal codons AGA/AGG as glycine.
    A Kondow, T Suzuki, S Yokobori, T Ueda, K Watanabe
    Nucleic acids research
    volume: 27 issue: 12 date: June 15, 1999 PUBMED ID: 10352185
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