tdbR00000363

NameValue
Coding AA: Arg
Anticodon sequence: PCU
Organism: Ascaris suum NCBI:txid6253
RNA type: mitochondrial
Sequence: GACAAAUGUUUPCAGGUCUUCU6AAPCUGUUUUGGAGAAAUCCGPUUGUUUCCA
Unmodified sequence: GACAAAUGUUUUCAGGUCUUCUAAAUCUGUUUUGGAGAAAUCCGUUUGUUUCCA
Secondary structure: (((((((............((((((.....)))))).......)))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -3.60
Pre-aligned sequence:
Pre-aligned secondary structure:
-GACAAAUGU----UUPCAGGUC-U----UCU6AA--PCUGUUUUGGAG-------------------A-A------AUCC-------GPUUGUUUCCA
.(((((((.....................((((((.......))))))........................................)))))))....
Publications:
  • Primary and higher order structures of nematode (Ascaris suum) mitochondrial tRNAs lacking either the T or D stem.
    Y Watanabe, H Tsurui, T Ueda, R Furushima, S Takamiya, K Kita, K Nishikawa, K Watanabe
    The Journal of biological chemistry
    volume: 269 issue: 36 date: Sept. 9, 1994 PUBMED ID: 8077242
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