tdbR00000004

Name	Value
Coding AA:	Ala
Anticodon sequence:	UGC
Organism:	Haloferax volcanii NCBI:txid2246
RNA type:	cytoplasmic
Sequence:	GGGCCCAUAGCUCAGUGGUAGAGULCCUCCUUUGCAAGGAGGAUGC??AGGG]PBGAAUCCCUGUGGGUCCACCA
Unmodified sequence:	GGGCCCAUAGCUCAGUGGUAGAGUGCCUCCUUUGCAAGGAGGAUGCCCAGGGUUCGAAUCCCUGUGGGUCCACCA
Secondary structure:	(((((((..((((.......)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-29.40
Pre-aligned sequence: Pre-aligned secondary structure:	-GGGCCCAUAGCUCAGU--GGU--AGAGULCCUCCUUUGCAAGGAGGAU-------------------GC??AGGG]PBGAAUCCCUGUGGGUCCACCA .(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:	Halobacterium volcanii tRNAs. Identification of 41 tRNAs covering all amino acids, and the sequences of 33 class I tRNAs. R Gupta The Journal of biological chemistry volume: 259 issue: 15 date: Aug. 10, 1984 PUBMED ID: 6746655
Comments:	48 PARTIALLY C

Model based on:

Moderna

RNA Composer