tdbR00000382

Name	Value
Coding AA:	Ser
Anticodon sequence:	MGA
Organism:	Haloferax volcanii NCBI:txid2246
RNA type:	cytoplasmic
Sequence:	GCCGAGGUAGCCPA(CCCGGCCAAGGCRGUAGAUUMGAAAPCUACUGUCCAUUCGGACA?GUGAG]PBOAAUCUCACCCUCGGCGCCA
Unmodified sequence:	GCCGAGGUAGCCUAGCCCGGCCAAGGCGGUAGAUUCGAAAUCUACUGUCCAUUCGGACACGUGAGUUCAAAUCUCACCCUCGGCGCCA
Secondary structure:	(((((((..((((..........))))((((((.......))))))..............(((((.......))))))))))))....
Homology model or structure extracted from PDB:	Model (last update Sept. 6, 2019)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]:	-28.10
Pre-aligned sequence: Pre-aligned secondary structure:	-GCCGAGGUAGCCPA(CCCGGCC-AAGGCRGUAGAUUMGAAAPCUACU-GUCC---AUUC----GGACA-?GUGAG]PBOAAUCUCACCCUCGGCGCCA .(((((((..((((...........))))((((((.......)))))).......................(((((.......))))))))))))....
Publications:	*Structure of the archaeal transfer RNA nucleoside G-15 (2-amino-4,7-dihydro- 4-oxo-7-beta-D-ribofuranosyl-1H-pyrrolo[2,3-d]pyrimidine-5-carboximi dam ide (archaeosine)).** J M Gregson, P F Crain, C G Edmonds, R Gupta, T Hashizume, D W Phillipson, J A McCloskey The Journal of biological chemistry volume: 268 issue: 14 date: May 15, 1993 PUBMED ID: 7683667 Transfer RNAs of Halobacterium volcanii: Sequences of five leucine and three serine tRNAs R. Gupta FEBS letters volume: 7 issue: 1 date: Jan. 1, 1986 PUBMED ID: - DOI: https://doi.org/10.1016/S0723-2020(86)80131-X
Comments:	34 PARTIALLY C