tdbR00000282

Name	Value
Coding AA:	Met
Anticodon sequence:	<AU
Organism:	Ascaris suum NCBI:txid6253
RNA type:	mitochondrial
Sequence:	AAPAAGAU"GGAUAAGUUGAGUCULPGAGGUU<AUACCCUCUUGGUGUUUUUCUCUUAPUGCCA
Unmodified sequence:	AAUAAGAUAGGAUAAGUUGAGUCUGUGAGGUUCAUACCCUCUUGGUGUUUUUCUCUUAUUGCCA
Secondary structure:	(((((((..((((.......))))(.((((.......)))).)...(.....))))))))....
Homology model or structure extracted from PDB:	Model Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-3.00
Pre-aligned sequence: Pre-aligned secondary structure:	-AAPAAGAU"GGAUAA---GUUG-AGUCULPGAGGUU<AUACCCUCUUG-------------------G-UG----UUUUU------CUCUUAPUGCCA .(((((((..((((...........))))(.((((.......)))).).......................(...............))))))))....
Publications:	Primary and higher order structures of nematode (Ascaris suum) mitochondrial tRNAs lacking either the T or D stem. Y Watanabe, H Tsurui, T Ueda, R Furushima, S Takamiya, K Kita, K Nishikawa, K Watanabe The Journal of biological chemistry volume: 269 issue: 36 date: Sept. 9, 1994 PUBMED ID: 8077242

Model based on:

RNA Composer