tdbR00000571

NameValue
Coding AA: Sec
Anticodon sequence: NCA
Organism: Homo sapiens NCBI:txid9606
RNA type: cytoplasmic
Sequence: GCCCGGAUGAUCCUCAGUGGUCUGGGGUGCAGGCUNCA+ACCUGUAGCUGUCUAGCGACAGAGUGGUPCA"UUCCACCUUUCGGGCGCCA
Unmodified sequence: GCCCGGAUGAUCCUCAGUGGUCUGGGGUGCAGGCUUCAAACCUGUAGCUGUCUAGCGACAGAGUGGUUCAAUUCCACCUUUCGGGCGCCA
Secondary structure: (((((((..((((........))))((((((.......))))))...............(((((.......))))))))))))....
PDB ID: 3a3a, 3hl2, 4zdo, 4zdp
Homology model or
structure extracted from PDB:
Extracted Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: 100000.00
Pre-aligned sequence:
Pre-aligned secondary structure:
-GCCCGGAU_CCUCAGU--GGUC-UGGGGUGCAGGCUNCA+ACCUGUAGCUGUC--UAGC---GACAG---AGUGGUPCA"UUCCA_UUUCGGGCGCCA
.(((((((..((((...........))))((((((.......)))))).......................(((((.......))))))))))))....
Publications:
  • Minor serine tRNA containing anticodon NCA (C4 RNA) from human and mouse cells.
    N Kato, H Hoshino, F Harada
    Biochemistry international
    volume: 7 issue: 5 PUBMED ID: 6435631
Comments: 34 N IS PROBABLY A MODIFIED U
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