tdbR00000027

NameValue
Coding AA: Asp
Anticodon sequence: GUC
Organism: Hordeum vulgare NCBI:txid4513
RNA type: plastid
Sequence: GGGAUUGUAGUUCAAUU#GDCAGAGCACCGCCCUGUCHAGGCGGAAG<UGCGGGTPCGAGCCCCGUCAGUCCCGCCA
Unmodified sequence: GGGAUUGUAGUUCAAUUGGUCAGAGCACCGCCCUGUCAAGGCGGAAGCUGCGGGUUCGAGCCCCGUCAGUCCCGCCA
Secondary structure: (((((((..((((.........)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -26.90
Pre-aligned sequence:
Pre-aligned secondary structure:
-GGGAUUGUAGUUCAAUU-#GDC-AGAGCACCGCCCUGUCHAGGCGGAA-------------------G<UGCGGGTPCGAGCCCCGUCAGUCCCGCCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Chloroplast tRNA(Asp): nucleotide sequence and variation of in vivo levels during plastid maturation.
    A Schön, S Gough, D Söll
    Plant molecular biology
    volume: 20 issue: 4 PUBMED ID: 1450377
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