tdbR00000576

Name	Value
Coding AA:	Asp
Anticodon sequence:	GUC
Organism:	Leishmania tarentolae NCBI:txid5689
RNA type:	cytoplasmic
Sequence:	UUCUCGGUAGUAUAGUGGUUAGUAUACCCGCCUGUCACGCGGGUGACCCGGGUUCAUUUCCCGGCCGGGAAG
Unmodified sequence:	UUCUCGGUAGUAUAGUGGUUAGUAUACCCGCCUGUCACGCGGGUGACCCGGGUUCAUUUCCCGGCCGGGAAG
Secondary structure:	(((((((..((((........)))).(((((.......)))))....(((((.......)))))))))))).
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-25.10
Pre-aligned sequence: Pre-aligned secondary structure:	-UUCUCGGUAGUAUAGU--GGUU-AGUAUACCCGCCUGUCACGCGGGUG-------------------A-CCCGGGUUCAUUUCCCGGCCGGGAAG--- .(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:	Differential localization of nuclear-encoded tRNAs between the cytosol and mitochondrion in Leishmania tarentolae. Stephen T Kapushoc, Juan D Alfonzo, Larry Simpson RNA (New York, N.Y.) volume: 8 issue: 1 PUBMED ID: 11871660
Comments:	PRESENT IN BOTH- CYTOSOL AND MITOCHONDRIA;IMPORTED FROM CYTO;DNA SEQUENCE WAS DETERMINED BY REVERSE TRANSCRIPTION OF TRNA;MODIFIED NUCLEOTIDES WERE NOT DETERMINED

Model based on:

Moderna

RNA Composer