tdbR00000398

Name	Value
Coding AA:	Ser
Anticodon sequence:	UCU
Organism:	Ascaris suum NCBI:txid6253
RNA type:	mitochondrial
Sequence:	GACAAAUGUUUPCAGGUCUUCU6AAPCUGUUUUGGAGAAAUCCGPUUGUUUCCA
Unmodified sequence:	GACAAAUGUUUUCAGGUCUUCUAAAUCUGUUUUGGAGAAAUCCGUUUGUUUCCA
Secondary structure:	(((((((.....(((((.......)))))....(((....))))))))))....
Homology model or structure extracted from PDB:	Model Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-6.90
Pre-aligned sequence: Pre-aligned secondary structure:	-GACAAAUG-----------------UUUPCAGGUCUUCU6AAPCUGUUUU--------------------GGA--GAAA-----UCCGPUUGUUUCCA .(((((((......................(((((.......)))))........................(((...........))))))))))....
Publications:	Primary and higher order structures of nematode (Ascaris suum) mitochondrial tRNAs lacking either the T or D stem. Y Watanabe, H Tsurui, T Ueda, R Furushima, S Takamiya, K Kita, K Nishikawa, K Watanabe The Journal of biological chemistry volume: 269 issue: 36 date: Sept. 9, 1994 PUBMED ID: 8077242
Comments:	FROM THE FAMILY OF TRNAS WITH NINE BASE PAIRS IN THE ANTICODON STEM

Model based on:

RNA Composer