tdbR00000593

Name	Value
Coding AA:	Trp
Anticodon sequence:	$CA
Organism:	Ascaris suum NCBI:txid6253
RNA type:	mitochondrial
Sequence:	ACAGAUUU"AGUUAAGUUUAAACUCPPGGPPU$CA*AACCAAAAAUUUUACUCPGUACCA
Unmodified sequence:	ACAGAUUUAAGUUAAGUUUAAACUCUUGGUUUUCAAAACCAAAAAUUUUACUCUGUACCA
Secondary structure:	(((((.(..((((.......)))).(((((.......))))).......).)))))....
Homology model or structure extracted from PDB:	Model Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-3.60
Pre-aligned sequence: Pre-aligned secondary structure:	-ACAGAUUU"AGUUAAGUUU----AAACUCPPGGPPU$CA*AACCAAAA-------------------A-U-----UUU---------ACUCPGUACCA .(((((.(..((((...........)))).(((((.......))))).........................................).)))))....
Publications:	Unusual usage of wobble modifications in mitochondrial tRNAs of the nematode Ascaris suum. Masayuki Sakurai, Takashi Ohtsuki, Tsutomu Suzuki, Kimitsuna Watanabe FEBS letters volume: 579 issue: 13 date: May 23, 2005 epub: April 20, 2005 PUBMED ID: 15907479
Comments:	34- PARTIALLY MODIFIED ; 70- PARTIALLY MODIFIED

Model based on:

RNA Composer