tdbR00000205

NameValue
Coding AA: Lys
Anticodon sequence: NUU
Organism: Loligo bleekeri NCBI:txid6617
RNA type: cytoplasmic
Sequence: GCCUUCAUALCUCAGDCGGUAGAGCAPCAGACUNUUHANCUGAGG7D?UGGGGJPCG"GUCCCCAULCGGG?UCCA
Unmodified sequence: GCCUUCAUAGCUCAGUCGGUAGAGCAUCAGACUUUUAAUCUGAGGGUCUGGGGUUCGAGUCCCCAUGCGGGCUCCA
Secondary structure: (((((((..((((........)))).((((.........)))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -23.00
Pre-aligned sequence:
Pre-aligned secondary structure:
-GCCUUCAUALCUCAGDC-GGU--AGAGCAPCAGACUNUUHANCUGAGG-------------------7D?UGGGGJPCG"GUCCCCAULCGGG?UCCA
.(((((((..((((...........)))).((((.........))))........................(((((.......))))))))))))....
Publications:
  • Highly specific and efficient cleavage of squid tRNA(Lys) catalyzed by magnesium ions.
    M Matsuo, T Yokogawa, K Nishikawa, K Watanabe, N Okada
    The Journal of biological chemistry
    volume: 270 issue: 17 date: April 28, 1995 PUBMED ID: 7730314
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