tdbR00000301

NameValue
Coding AA: Asn
Anticodon sequence: QUU
Organism: Lupinus luteus NCBI:txid3873
RNA type: cytoplasmic
Sequence: GCCUCAGUALCUCAGDGGDXAGAGCRGUCGGBUQUU6ACCGAUAG7D?GUAGGTPCG"GCCCUACUUGGGGCGCCA
Unmodified sequence: GCCUCAGUAGCUCAGUGGUUAGAGCGGUCGGCUGUUAACCGAUAGGUCGUAGGUUCGAGCCCUACUUGGGGCGCCA
Secondary structure: (((((((..((((........)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:		 Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]: -25.10
Pre-aligned sequence:
Pre-aligned secondary structure:		 -GCCUCAGUALCUCAGD--GGDX-AGAGCRGUCGGBU;UU6ACCGAUAG-------------------7D?GUAGGTPCG"GCCCUACUUGGGGCGCCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • MODOMICS: a database of RNA modification pathways. 2017 update.
    Pietro Boccaletto, Magdalena A Machnicka, Elzbieta Purta, Pawel Piatkowski, Blazej Baginski, Tomasz K Wirecki, Valérie de Crécy-Lagard, Robert Ross, Patrick A Limbach, Annika Kotter, Mark Helm, Janusz M Bujnicki
    Nucleic acids research
    volume: 46 issue: D1 date: Jan. 4, 2018 PUBMED ID: 29106616 DOI: 10.1093/nar/gkx1030
  • The nucleotide sequences of two Lupinus luteus asparagine tRNAs.
    M Z Barciszewska, D S Jones
    Nucleic acids research
    volume: 16 issue: 19 date: Oct. 11, 1988 PUBMED ID: 3174459
Comments: 34 PARTIALLY MODIFIED

Secondary structure

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Tertiary structure

Model based on:
Moderna
RNA Composer
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