tdbR00000101

NameValue
Coding AA: Phe
Anticodon sequence: #AA
Organism: Mus musculus NCBI:txid10090
RNA type: cytoplasmic
Sequence: GCCGAAAUALCUC"GDDGGGAGAGCRPPAGABU#AAYAPCUAAAG7UC?CUGGTPCG"UCCCGGGUUUCGGCACCA
Unmodified sequence: GCCGAAAUAGCUCAGUUGGGAGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCACCA
Secondary structure: (((((((..((((........)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -21.90
Pre-aligned sequence:
Pre-aligned secondary structure:
-GCCGAAAUALCUC"GDD-GGG--AGAGCRPPAGABU#AAYAPCUAAAG-------------------7UC?CUGGTPCG"UCCCGGGUUUCGGCACCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Changes of post-transcriptional modification of wye base in tumor-specific tRNAPhe.
    Y Kuchino, E Borek, D Grunberger, J F Mushinski, S Nishimura
    Nucleic acids research
    volume: 10 issue: 20 date: Oct. 25, 1982 PUBMED ID: 6924749
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