tdbR00000512

NameValue
Coding AA: Ini
Anticodon sequence: CAU
Organism: Mycobacterium smegmatis NCBI:txid1772
RNA type: cytoplasmic
Sequence: CGCGGGGUGGAGCAGCUCGGDAGCUCGCUGGGCUCAUAACCCAGAG7UCGCAGGUPCG"AUCCUGUCCCCGCUACCA
Unmodified sequence: CGCGGGGUGGAGCAGCUCGGUAGCUCGCUGGGCUCAUAACCCAGAGGUCGCAGGUUCGAAUCCUGUCCCCGCUACCA
Secondary structure: .((((((..((((.........)))).(((((.......))))).....(((((.......))))))))))).....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -29.60
Pre-aligned sequence:
Pre-aligned secondary structure:
-CGCGGGGUGGAGCAGCUCGGD--AGCUCGCUGGGCUCAUAACCCAGAG-------------------7UCGCAGGUPCG"AUCCUGUCCCCGCUACCA
..((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))).....
Publications:
  • Nucleotide sequence of initiator tRNA from Mycobacterium smegmatis.
    B R Vani, T Ramakrishnan, Y Kuchino, S Nishimura
    Nucleic acids research
    volume: 12 issue: 9 date: May 11, 1984 PUBMED ID: 6728683
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