tdbR00000177

NameValue
Coding AA: Lys
Anticodon sequence: CUU
Organism: Mycoplasma capricolum NCBI:txid2095
RNA type: cytoplasmic
Sequence: GUCUGAUUAGCGCAACDGGCAGAGCAACUGACUCUU6APCAGUGG7UUGUGGGUPCGAUUCCCACAUCAGGCACCA
Unmodified sequence: GUCUGAUUAGCGCAACUGGCAGAGCAACUGACUCUUAAUCAGUGGGUUGUGGGUUCGAUUCCCACAUCAGGCACCA
Secondary structure: (((((((..((.(........).)).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -20.30
Pre-aligned sequence:
Pre-aligned secondary structure:
-GUCUGAUUAGCGCAACD-GGC--AGAGCAACUGACUCUU6APCAGUGG-------------------7UUGUGGGUPCGAUUCCCACAUCAGGCACCA
.(((((((..((.(...........).)).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Codon recognition patterns as deduced from sequences of the complete set of transfer RNA species in Mycoplasma capricolum. Resemblance to mitochondria.
    Y Andachi, F Yamao, A Muto, S Osawa
    Journal of molecular biology
    volume: 209 issue: 1 date: Sept. 5, 1989 PUBMED ID: 2478713
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