tdbR00000451

NameValue
Coding AA: Val
Anticodon sequence: UAC
Organism: Mycoplasma capricolum NCBI:txid2095
RNA type: cytoplasmic
Sequence: GGAGUGUUAGCUCAGCDGGGAGAGCUCCUGCCUUAC=AGCAGGCG7UCAUAGGUPCAAGUCCUAUACACUCCACCA
Unmodified sequence: GGAGUGUUAGCUCAGCUGGGAGAGCUCCUGCCUUACAAGCAGGCGGUCAUAGGUUCAAGUCCUAUACACUCCACCA
Secondary structure: (((((((..((((........)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -25.30
Pre-aligned sequence:
Pre-aligned secondary structure:
-GGAGUGUUAGCUCAGCD-GGG--AGAGCUCCUGCCUUAC=AGCAGGCG-------------------7UCAUAGGUPCAAGUCCUAUACACUCCACCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Codon recognition patterns as deduced from sequences of the complete set of transfer RNA species in Mycoplasma capricolum. Resemblance to mitochondria.
    Y Andachi, F Yamao, A Muto, S Osawa
    Journal of molecular biology
    volume: 209 issue: 1 date: Sept. 5, 1989 PUBMED ID: 2478713
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