tdbR00000617

NameValue
Coding AA: Gln
Anticodon sequence: UUG
Organism: Nanoarchaeum equitans NCBI:txid160232
RNA type: cytoplasmic
Sequence: AGCCCCGUGGUGUAGCGGCCUAGCAUGCGGGGUUUUGGUCCCCGUGACCCCGGUUCGAAUCCGGGCGGGGCUACCA
Unmodified sequence: AGCCCCGUGGUGUAGCGGCCUAGCAUGCGGGGUUUUGGUCCCCGUGACCCCGGUUCGAAUCCGGGCGGGGCUACCA
Secondary structure: (((((((..((((.........)))).(((((.......)))))....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:		 Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -31.40
Pre-aligned sequence:
Pre-aligned secondary structure:		 -AGCCCCGUGGUGUAGC--GGCCUAGCAUGCGGGGUUUUGGUCCCCGUG-------------------A-CCCCGGUUCGAAUCCGGGCGGGGCUACCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • The complete set of tRNA species in Nanoarchaeum equitans.
    Lennart Randau, Michael Pearson, Dieter Söll
    FEBS letters
    volume: 579 issue: 13 date: May 23, 2005 PUBMED ID: 15893316
Comments: DNA SEQUENCE WAS DETERMINED BY REVERSE TRANSCRIPTION OF TRNA;MODIFIED NUCLEOTIDES WERE NOT DETERMINED
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