tdbR00000613

Name	Value
Coding AA:	Glu
Anticodon sequence:	CUC
Organism:	Nanoarchaeum equitans NCBI:txid160232
RNA type:	cytoplasmic
Sequence:	GCCCCCGUGGUGUAGCCAGGUCUAGCAUACGGGGUUCUCGUCCCCGUGACCCGGGUUCAAAUCCCGGCGGGGGCACCA
Unmodified sequence:	GCCCCCGUGGUGUAGCCAGGUCUAGCAUACGGGGUUCUCGUCCCCGUGACCCGGGUUCAAAUCCCGGCGGGGGCACCA
Secondary structure:	(((((((..((((...........)))).(((((.......)))))....(((((.......))))))))))))....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-34.20
Pre-aligned sequence: Pre-aligned secondary structure:	-GCCCCCGUGGUGUAGCCAGGUCUAGCAUACGGGGUUCUCGUCCCCGUG-------------------A-CCCGGGUUCAAAUCCCGGCGGGGGCACCA .(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:	Nanoarchaeum equitans creates functional tRNAs from separate genes for their 5'- and 3'-halves. Lennart Randau, Richard Münch, Michael J Hohn, Dieter Jahn, Dieter Söll Nature volume: 433 issue: 7025 date: Feb. 3, 2005 PUBMED ID: 15690044
Comments:	DNA SEQUENCE WAS DETERMINED BY REVERSE TRANSCRIPTION OF TRNA;MODIFIED NUCLEOTIDES WERE NOT DETERMINED

Model based on:

Moderna

RNA Composer