tdbR00000525

NameValue
Coding AA: Ini
Anticodon sequence: CAU
Organism: Neurospora crassa NCBI:txid5141
RNA type: cytoplasmic
Sequence: AGCUGCAUKGCGCAGCGGAAGCGCRC.GGGCUCAU6ACCCGGAG7DCACUCGAUCG"AACGA;UUGCAGCUACCA
Unmodified sequence: AGCUGCAUGGCGCAGCGGAAGCGCGC_GGGCUCAUAACCCGGAGGUCACUCGAUCGAAACGAGUUGCAGCUACCA
Secondary structure: (((((((..((((.......)))).(.(((.......))).).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -23.10
Pre-aligned sequence:
Pre-aligned secondary structure:
-AGCUGCAUKGCGCAGC--GGA--AGCGCRC.GGGCUCAU6ACCCGGAG-------------------7DCACUCGAUCG"AACGA;UUGCAGCUACCA
.(((((((..((((...........)))).(.(((.......))).)........................(((((.......))))))))))))....
Publications:
  • Nucleotide sequence of Neurospora crassa cytoplasmic initiator tRNA.
    A M Gillum, L I Hecker, M Silberklang, S D Schwartzbach, U L RajBhandary, W E Barnett
    Nucleic acids research
    volume: 4 issue: 12 PUBMED ID: 146192
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