tdbR00000235

NameValue
Coding AA: Leu
Anticodon sequence: NAA
Organism: Neurospora crassa NCBI:txid5141
RNA type: mitochondrial
Sequence: AUCCGAGUGAUGGAADGGDAGACAUAACAUGCUNAAAACAUGUGGGCUUCAAGCUGUGAAGGTPCAAGUCCUUCUUCGGAUACCA
Unmodified sequence: AUCCGAGUGAUGGAAUGGUAGACAUAACAUGCUUAAAACAUGUGGGCUUCAAGCUGUGAAGGUUCAAGUCCUUCUUCGGAUACCA
Secondary structure: (((((((..(((..........))).(((((.......)))))..............(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -15.50
Pre-aligned sequence:
Pre-aligned secondary structure:
-AUCCGAGUGAUGGAAD--GGDA-GACAUAACAUGCUNAAAACAUGUG-GGCU---UCA-----AGCUG-UGAAGGTPCAAGUCCUUCUUCGGAUACCA
.(((((((..(((.............))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Novel features in the genetic code and codon reading patterns in Neurospora crassa mitochondria based on sequences of six mitochondrial tRNAs.
    J E Heckman, J Sarnoff, B Alzner-DeWeerd, S Yin, U L RajBhandary
    Proceedings of the National Academy of Sciences of the United States of America
    volume: 77 issue: 6 PUBMED ID: 6447871
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