tdbR00000440

NameValue
Coding AA: Thr
Anticodon sequence: UGU
Organism: Neurospora crassa NCBI:txid5141
RNA type: mitochondrial
Sequence: GCCUGGUUAGCAUAAAAGDAAUGCAAUUGPUUUGU6APCAAUAGAAGCAAGTGCGAUACUUGCACUGGGCUCCA
Unmodified sequence: GCCUGGUUAGCAUAAAAGUAAUGCAAUUGUUUUGUAAUCAAUAGAAGCAAGUGCGAUACUUGCACUGGGCUCCA
Secondary structure: (((((((..((((.......)))).((((.........))))....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -15.90
Pre-aligned sequence:
Pre-aligned secondary structure:
-GCCUGGUUAGCAUAAA--AGD--AAUGCAAUUGPUUUGU6APCAAUAG-------------------A-AGCAAGTGCGAUACUUGCACUGGGCUCCA
.(((((((..((((...........)))).((((.........))))........................(((((.......))))))))))))....
Publications:
  • Novel features in the genetic code and codon reading patterns in Neurospora crassa mitochondria based on sequences of six mitochondrial tRNAs.
    J E Heckman, J Sarnoff, B Alzner-DeWeerd, S Yin, U L RajBhandary
    Proceedings of the National Academy of Sciences of the United States of America
    volume: 77 issue: 6 PUBMED ID: 6447871
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