tdbR00000550

Name	Value
Coding AA:	Tyr
Anticodon sequence:	GUA
Organism:	Neurospora crassa NCBI:txid5141
RNA type:	mitochondrial
Sequence:	AGGAGGGUUCCGUUUGUUGGDAUGACGGRPUAAGCUGUAHACUUAAUGA<UAAUUAGU?GU<GAAGGTPCAAUUCCUUUCUCUCCUACCA
Unmodified sequence:	AGGAGGGUUCCGUUUGUUGGUAUGACGGGUUAAGCUGUAAACUUAAUGACUAAUUAGUCGUCGAAGGUUCAAUUCCUUUCUCUCCUACCA
Secondary structure:	(((((((..((((...........))))((((((.......))))))...............(((((.......))))))))))))....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-17.00
Pre-aligned sequence: Pre-aligned secondary structure:	-AGGAGGGUUCCGUUUGUUGGDAUGACGGRPUAAGCUGUAHACUUAAU-GA<UA--AU-----UAGU?GU<GAAGGTPCAAUUCCUUUCUCUCCUACCA .(((((((..((((...........))))((((((.......)))))).......................(((((.......))))))))))))....
Publications:	Interesting and unusual features in the sequence of Neurospora crassa mitochondrial tyrosine transfer RNA. J E Heckman, B Alzner-Deweerd, U L RajBhandary Proceedings of the National Academy of Sciences of the United States of America volume: 76 issue: 2 PUBMED ID: 154673
Comments:	37 H IS PROBABLY + (A4); 47 PROBABLY MODIFIED; 48 PROBABLY MODIFIED

Model based on:

Moderna

RNA Composer