tdbR00000415

Name	Value
Coding AA:	Ser
Anticodon sequence:	&GA
Organism:	Nicotiana rustica NCBI:txid4093
RNA type:	cytoplasmic
Sequence:	GUCGAUAUGUCCGAGD#GDDAAGGARACAGA'U&GA`APCUGUJGGGCUUCGCCCGCGCAGGTPCG"ACCCUGCUGUCGACGCCA
Unmodified sequence:	GUCGAUAUGUCCGAGUGGUUAAGGAGACAGACUUGAAAUCUGUUGGGCUUCGCCCGCGCAGGUUCGAACCCUGCUGUCGACGCCA
Secondary structure:	(((((((..(((..........)))((((((.......)))))).............(((((.......))))))))))))....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-21.40
Pre-aligned sequence: Pre-aligned secondary structure:	-GUCGAUAUGUCCGAGD--#GDD-AAGGARACAGA'U&GA`APCUGUJ-GGGC---UUC-----GCCCG-CGCAGGTPCG"ACCCUGCUGUCGACGCCA .(((((((..(((.............)))((((((.......)))))).......................(((((.......))))))))))))....
Publications:	The tRNA(Ser)-isoacceptors and their genes in Nicotiana rustica: genome organization, expression in vitro and sequence analyses. T Teichmann, C Urban, H Beier Plant molecular biology volume: 24 issue: 6 PUBMED ID: 8204826

Model based on:

Moderna

RNA Composer