tdbR00000417

NameValue
Coding AA: Ser
Anticodon sequence: GCU
Organism: Nicotiana rustica NCBI:txid4093
RNA type: cytoplasmic
Sequence: GUCGCCUUGGCCGAGD#GDDAAGGCRPGUGC'UGCU6AGPACAJGGGGUUUCCCCGCGAGAGTPCG"AUCUCUCAGGCGACGCCA
Unmodified sequence: GUCGCCUUGGCCGAGUGGUUAAGGCGUGUGCCUGCUAAGUACAUGGGGUUUCCCCGCGAGAGUUCGAAUCUCUCAGGCGACGCCA
Secondary structure: (((((((..(((..........)))((((((.......)))))).............(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -26.60
Pre-aligned sequence:
Pre-aligned secondary structure:
-GUCGCCUUGGCCGAGD--#GDD-AAGGCRPGUGC'UGCU6AGPACAJ-GGGG---UUU-----CCCCG-CGAGAGTPCG"AUCUCUCAGGCGACGCCA
.(((((((..(((.............)))((((((.......)))))).......................(((((.......))))))))))))....
Publications:
  • The tRNA(Ser)-isoacceptors and their genes in Nicotiana rustica: genome organization, expression in vitro and sequence analyses.
    T Teichmann, C Urban, H Beier
    Plant molecular biology
    volume: 24 issue: 6 PUBMED ID: 8204826
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