tdbR00000496

NameValue
Coding AA: Trp
Anticodon sequence: BCA
Organism: Nicotiana tabacum NCBI:txid4097
RNA type: cytoplasmic
Sequence: GGAUCCGUKGCGCAAD#GDAGCGCGPCUGABUBCAKA]CAGAAGGDNGCGUGTPCG"UUCACGPCGGGUUCACCA
Unmodified sequence: GGAUCCGUGGCGCAAUGGUAGCGCGUCUGACUCCAGAUCAGAAGGUUGCGUGUUCGAUUCACGUCGGGUUCACCA
Secondary structure: (((((((..((((.......)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -22.60
Pre-aligned sequence:
Pre-aligned secondary structure:
-GGAUCCGUKGCGCAAD--#GD--AGCGCGPCUGABUBCAKA]CAGAAG-------------------GDNGCGUGTPCG"UUCACGPCGGGUUCACCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • The leaky UGA termination codon of tobacco rattle virus RNA is suppressed by tobacco chloroplast and cytoplasmic tRNAs(Trp) with CmCA anticodon.
    K Zerfass, H Beier
    The EMBO journal
    volume: 11 issue: 11 PUBMED ID: 1396598
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