tdbR00000471

NameValue
Coding AA: Val
Anticodon sequence: IAC
Organism: Oryctolagus cuniculus NCBI:txid9986
RNA type: cytoplasmic
Sequence: GUUUCCGUAGUGPAGDGGDDAUCACLPUCGCBUIACA?GCGAAAG7D??CCGGUPCG"AACCGGGCGGAAACACCA
Unmodified sequence: GUUUCCGUAGUGUAGUGGUUAUCACGUUCGCCUAACACGCGAAAGGUCCCCGGUUCGAAACCGGGCGGAAACACCA
Secondary structure: (((((((..(((..........))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:		 Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -22.60
Pre-aligned sequence:
Pre-aligned secondary structure:		 -GUUUCCGUAGUGPAGD--GGDD-AUCACLPUCGCBUIACA?GCGAAAG-------------------7D??CCGGUPCG"AACCGGGCGGAAACACCA
.(((((((..(((.............))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Rabbit liver tRNA1Val:II. unusual secondary structure of T psi C stem and loop due to a U54:A60 base pair.
    P Jank, D Riesner, H J Gross
    Nucleic acids research
    volume: 4 issue: 6 PUBMED ID: 331268
Comments: 32 PARTIALLY C ; 38 PARTIALLY C ; 48 PARTIALLY C ; 49 PARTIALLY C
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