tdbR00000325

NameValue
Coding AA: Pro
Anticodon sequence: &GG
Organism: Pichia jadinii NCBI:txid4903
RNA type: cytoplasmic
Sequence: GGCBGCGUKGUCPAGDGGDAUGAUACUCGCUU&GGKPGPGAGUG7D??AGGGTPCA"UUCCCUGCUCGGCCCCCA
Unmodified sequence: GGCCGCGUGGUCUAGUGGUAUGAUACUCGCUUUGGGUGUGAGUGGUCCAGGGUUCAAUUCCCUGCUCGGCCCCCA
Secondary structure: (((((.(..(((.........)))((((((.......))))))....(((((.......)))))).)))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -22.80
Pre-aligned sequence:
Pre-aligned secondary structure:
-GGCBGCGUKGUCPAGD--GGD--AUGAUACUCGCUU&GGKPGPGAGUG-------------------7D??AGGGTPCA"UUCCCUGCUCGGCCCCCA
.(((((.(..(((.............)))((((((.......)))))).......................(((((.......)))))).)))))....
Publications:
  • The nucleotide sequence and codon recognition of proline tRNA from Torulopsis utilis.
    K Ogawa, M Kawakami, Y Shimizu, S Takemura
    Journal of biochemistry
    volume: 91 issue: 4 PUBMED ID: 6920386
  • A modified nucleoside located in the anticodon of proline tRNA from Torulopsis utilis is 5-carbamoylmethyluridine.
    K Ogawa, T Kondo, M Kawakami, S Takemura
    Nucleic acids symposium series
    issue: 12 PUBMED ID: 6686673
Your browser does not support the canvas element.