tdbR00000156

NameValue
Coding AA: Ile
Anticodon sequence: }AU
Organism: Bacillus subtilis NCBI:txid1423
RNA type: cytoplasmic
Sequence: GGACCUUUAGCUCAGUDGGDDAGAGCAGACGGCU}AU=ACCGUCCG7UCGUAGGTPCGAGUCCUACAAGGUCCACCA
Unmodified sequence: GGACCUUUAGCUCAGUUGGUUAGAGCAGACGGCUCAUAACCGUCCGGUCGUAGGUUCGAGUCCUACAAGGUCCACCA
Secondary structure: (((((((..((((.........)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -27.20
Pre-aligned sequence:
Pre-aligned secondary structure:
-GGACCUUUAGCUCAGUD-GGDD-AGAGCAGACGGCU}AU=ACCGUCCG-------------------7UCGUAGGTPCGAGUCCUACAAGGUCCACCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Characterization of a B. subtilis minor isoleucine tRNA deduced from tDNA having a methionine anticodon CAT.
    J Matsugi, K Murao, H Ishikura
    Journal of biochemistry
    volume: 119 issue: 4 PUBMED ID: 8743586
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