tdbR00000189

NameValue
Coding AA: Lys
Anticodon sequence: NUU
Organism: Rattus norvegicus NCBI:txid10116
RNA type: mitochondrial
Sequence: CAUUGCGA"LCUUAGAGCLPUAACCUNUU6AGUUAAAGUUAGAGACAACAAAUCUCCACAAUGACCA
Unmodified sequence: CAUUGCGAAGCUUAGAGCGUUAACCUUUUAAGUUAAAGUUAGAGACAACAAAUCUCCACAAUGACCA
Secondary structure: (((((.(..((((.)))).(((((.......))))).....((((.......))))).)))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: 99985.70
Pre-aligned sequence:
Pre-aligned secondary structure:
-CAUUGCGA"LCUU----------AGAGCLPUAACCUNUU6AGUUAAAG-------------------UUAGAGA-CAACAAA-UCUCCACAAUGACCA
.(((((.(..((((...........)))).(((((.......)))))........................((((.........))))).)))))....
Publications:
  • Rat liver mitochondrial lysine tRNA (anticodon U*UU) contains a rudimentary D-arm and 2 hypermodified nucleotides in its anticodon loop.
    E Randerath, H P Agrawal, K Randerath
    Biochemical and biophysical research communications
    volume: 103 issue: 2 date: Nov. 30, 1981 PUBMED ID: 6916605
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