tdbR00000219

NameValue
Coding AA: Leu
Anticodon sequence: CAG
Organism: Bacillus subtilis NCBI:txid1423
RNA type: cytoplasmic
Sequence: GCGGGUGUGCGGGAAUDGGDAGACCGGCUAGAUUCAGKAPCUAGGGUCUUUAUGGACCUGAGGGTPCA"GUCCCUUCACCCGCACCA
Unmodified sequence: GCGGGUGUGCGGGAAUUGGUAGACCGGCUAGAUUCAGGAUCUAGGGUCUUUAUGGACCUGAGGGUUCAAGUCCCUUCACCCGCACCA
Secondary structure: (((((((..(((...........))).(((((.......)))))...............(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -25.40
Pre-aligned sequence:
Pre-aligned secondary structure:
-GCGGGUGUGCGGGAAUD-GGDA-GACCGGCUAGAUUCAGKAPCUAGG-GUCU---UUAU----GGACC-UGAGGGTPCA"GUCCCUUCACCCGCACCA
.(((((((..(((.............))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • A thermostable Gm-methylase recognizes the tertiary structure of tRNA.
    T Matsumoto, T Ohta, I Kumagai, T Oshima, K Murao, T Hasegawa, H Ishikura, K Watanabe
    Journal of biochemistry
    volume: 101 issue: 5 PUBMED ID: 3308861
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