tdbR00000224

NameValue
Coding AA: Leu
Anticodon sequence: CAA
Organism: Rhodospirillum rubrum NCBI:txid1085
RNA type: cytoplasmic
Sequence: GCCUUUGUAGCGGAADGGDAACGCGGCAGACUCAAHAPCUGCUUUGGUAACCCAGGUGGUAGTPCGACUCUCCCCAAAGGCACCA
Unmodified sequence: GCCUUUGUAGCGGAAUGGUAACGCGGCAGACUCAAAAUCUGCUUUGGUAACCCAGGUGGUAGUUCGACUCUCCCCAAAGGCACCA
Secondary structure: (((((((..(((.........)))((((((.......))))))..............((.((.......)).)))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -19.90
Pre-aligned sequence:
Pre-aligned secondary structure:
-GCCUUUGUAGCGGAAD--GGD--AACGCGGCAGACUCAAHAPCUGCU-UUGG---UAAC----CCAGG-UGGUAGTPCGACUCUCCCCAAAGGCACCA
.(((((((..(((.............)))((((((.......)))))).......................((.((.......)).)))))))))....
Publications:
  • The nucleotide sequence of phenylalanine tRNA and 5S RNA from Rhodospirillum rubrum.
    N Newhouse, K Nicoghosian, R J Cedergren
    Canadian journal of biochemistry
    volume: 59 issue: 11-12 PUBMED ID: 6174192
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