tdbR00000526

NameValue
Coding AA: Ini
Anticodon sequence: CAU
Organism: Saccharomyces cerevisiae NCBI:txid4932
RNA type: cytoplasmic
Sequence: AGCGCCGUKLCGCAGDGGAAGCGCRCAGGGCUCAU6ACCCUGAU7D??UCGGAUCG"AACCG^GCGGCGCUACCA
Unmodified sequence: AGCGCCGUGGCGCAGUGGAAGCGCGCAGGGCUCAUAACCCUGAUGUCCUCGGAUCGAAACCGAGCGGCGCUACCA
Secondary structure: (((((((..((((.......)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:		 Model Download (by RNA Composer) (last update July 2, 2025)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]: -32.10
Pre-aligned sequence:
Pre-aligned secondary structure:		 -AGCGCCGUKLCGCAGD--GGA--AGCGCRCAGGGCUCAU6ACCCUGAU-------------------7D??UCGGAUCG"AACCG^GCGGCGCUACCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • The primary structure of yeast initiator transfer ribonucleic acid.
    M Simsek, U L RajBhandary
    Biochemical and biophysical research communications
    volume: 49 issue: 2 date: Oct. 17, 1972 PUBMED ID: 4344891
  • Site-directed protection of RNA during nuclease digestion.
    N Beauchemin, J Paquette, R Cedergren
    Biochemistry and cell biology = Biochimie et biologie cellulaire
    volume: 65 issue: 1 PUBMED ID: 2436641
  • Presence of phosphorylated O-ribosyl-adenosine in T-psi-stem of yeast methionine initiator tRNA.
    J Desgrès, G Keith, K C Kuo, C W Gehrke
    Nucleic acids research
    volume: 17 issue: 3 date: Feb. 11, 1989 PUBMED ID: 2646591
Comments: 64 N IS O-RIBOSYL-ADENOSIN

Secondary structure

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Tertiary structure

Model based on:
RNA Composer
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