tdbR00000193

NameValue
Coding AA: Lys
Anticodon sequence: 3UU
Organism: Saccharomyces cerevisiae NCBI:txid4932
RNA type: cytoplasmic
Sequence: PCCUUGUUALCUCAGDDGGDAGAGCRPPCGGCU3UU6ACCGAAAU7D?AGGGGTPCG"GCCCCCUAPGAGGAGCCA
Unmodified sequence: UCCUUGUUAGCUCAGUUGGUAGAGCGUUCGGCUUUUAACCGAAAUGUCAGGGGUUCGAGCCCCCUAUGAGGAGCCA
Secondary structure: (((((((..((((........)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -21.80
Pre-aligned sequence:
Pre-aligned secondary structure:
-PCCUUGUUALCUCAGDD-GGD--AGAGCRPPCGGCU)UU6ACCGAAAU-------------------7D?AGGGGTPCG"GCCCCCUAPGAGGAGCCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Partial digestion of a yeast lysine transfer ribonucleic acid and reconstruction of the nucleotide sequence.
    J T Madison, S J Boguslawski
    Biochemistry
    volume: 13 issue: 3 date: Jan. 29, 1974 PUBMED ID: 4589316
  • MODOMICS: a database of RNA modification pathways. 2017 update.
    Pietro Boccaletto, Magdalena A Machnicka, Elzbieta Purta, Pawel Piatkowski, Blazej Baginski, Tomasz K Wirecki, Valérie de Crécy-Lagard, Robert Ross, Patrick A Limbach, Annika Kotter, Mark Helm, Janusz M Bujnicki
    Nucleic acids research
    volume: 46 issue: D1 date: Jan. 4, 2018 PUBMED ID: 29106616 DOI: 10.1093/nar/gkx1030
Comments: 34 IS A DERIVATIVE OF )
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