tdbR00000406

NameValue
Coding AA: Ser
Anticodon sequence: &GA
Organism: Saccharomyces cerevisiae NCBI:txid4932
RNA type: cytoplasmic
Sequence: GGCACUAUGGCMGAGD#GDDAAGGCRACAGA'U&GA+APCUGUJGGGCUCUGCCCG?GCUGGTPCAAAUCCUGCUGGUGUCGCCA
Unmodified sequence: GGCACUAUGGCCGAGUGGUUAAGGCGACAGACUUGAAAUCUGUUGGGCUCUGCCCGCGCUGGUUCAAAUCCUGCUGGUGUCGCCA
Secondary structure: (((((((..(((..........)))((((((.......)))))).............((.((.......)).)))))))))....
Homology model or
structure extracted from PDB:		 Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]: -19.60
Pre-aligned sequence:
Pre-aligned secondary structure:		 -GGCACUAUGGCMGAGD--#GDD-AAGGCRACAGA<UNGA+APCUGUJ-GGGC---UCU-----GCCCG-?GCUGGTPCAAAUCCUGCUGGUGUCGCCA
.(((((((..(((.............)))((((((.......)))))).......................((.((.......)).)))))))))....
Publications:
  • Only one of two closely related yeast suppressor tRNA genes contains an intervening sequence.
    M V Olson, G S Page, A Sentenac, P W Piper, M Worthington, R B Weiss, B D Hall
    Nature
    volume: 291 issue: 5815 date: June 11, 1981 PUBMED ID: 6262655
  • Actin-binding protein ABP140 is a methyltransferase for 3-methylcytidine at position 32 of tRNAs in Saccharomyces cerevisiae.
    Akiko Noma, Sanghyun Yi, Takayuki Katoh, Yoshimi Takai, Takeo Suzuki, Tsutomu Suzuki
    RNA (New York, N.Y.)
    volume: 17 issue: 6 epub: April 25, 2011 PUBMED ID: 21518805 DOI: 10.1261/rna.2653411
Comments: 32 < IS PROBABLY '

Secondary structure

Your browser does not support the canvas element.

Tertiary structure

Model based on:
Moderna
RNA Composer
We are using technical cookies that are necessary for page to work correctly.