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tdbR00000555

NameValue
Coding AA: Tyr
Anticodon sequence: GPA
Organism: Saccharomyces cerevisiae NCBI:txid4932
RNA type: cytoplasmic
Sequence: CUCUCGGUALCCAAGDD#GDDDAAGGCRCAAGACUGPA+APCUUGAGAD?GGGCGTPCG"CUCGCCCCCGGGAGACCA
Unmodified sequence: CUCUCGGUAGCCAAGUUGGUUUAAGGCGCAAGACUGUAAAUCUUGAGAUCGGGCGUUCGACUCGCCCCCGGGAGACCA
Secondary structure: (((((((..(((............))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:		 Model Download (by RNA Composer) (last update July 2, 2025)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: June 29, 2026
Folding free energy [kcal/mol]: -25.10
Pre-aligned sequence:
Pre-aligned secondary structure:		 -CUCUCGGUALCCAAGDD-#GDDDAAGGCRCAAGACUGPA+APCUUGAG-------------------AD?GGGCGTPCG"CUCGCCCCCGGGAGACCA
.(((((((..(((.............))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Large oligonucleotides isolated from yeast tyrosine transfer ribonucleic acid after partial digestion with ribonuclease T1.
    J T Madison, H K Kung
    The Journal of biological chemistry
    volume: 242 issue: 6 date: March 25, 1967 PUBMED ID: 6023574

Aminoacylation

NameValue
Positive identity elements regulating aminoacylation: A73; C1-G72; G34; U35
Negative identity elements antideterminants of aminoacylation: NA
Citation: Tsunoda,M., Kusakabe,Y., Tanaka,N., Ohno,S., Nakamura,M., Senda,T., Moriguchi,T., Asai,N., Sekine,M., Yokogawa,T. et al. (2007) Structural basis for recognition of cognate tRNA by tyrosyl-tRNA synthetase from three kingdoms. Nucleic Acids Res., 35, 4289–4300.
DOI: 10.1093/nar/gkm435
PMID: 17576676

Secondary structure

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Tertiary structure

Model based on:
RNA Composer