tdbR00000466

NameValue
Coding AA: Val
Anticodon sequence: &AC
Organism: Saccharomyces cerevisiae NCBI:txid4932
RNA type: cytoplasmic
Sequence: GGUCCAAUGLUCCAGDGGDDCAAGACRPCGCCPU&ACACGGCGAAGADC?CGAGTPCG"ACCUCGGUUGGAUCACCA
Unmodified sequence: GGUCCAAUGGUCCAGUGGUUCAAGACGUCGCCUUUACACGGCGAAGAUCCCGAGUUCGAACCUCGGUUGGAUCACCA
Secondary structure: (((((((..(((...........))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -21.70
Pre-aligned sequence:
Pre-aligned secondary structure:
-GGUCCAAUGLUCCAGD--GGDDCAAGACRPCGCCPU&ACACGGCGAAG-------------------ADC?CGAGTPCG"ACCUCGGUUGGAUCACCA
.(((((((..(((.............))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Nucleotide sequence in tRNA Val-2a from baker's yeast.
    V D Axel'rod, V M Kryukov, S N Isaenko, A A Bayev
    FEBS letters
    volume: 45 issue: 1 date: Sept. 1, 1974 PUBMED ID: 4606852
  • Modified nucleoside, 5-carbamoylmethyluridine, located in the first position of the anticodon of yeast valine tRNA.
    N Yamamoto, Z Yamaizumi, S Yokoyama, T Miyazawa, S Nishimura
    Journal of biochemistry
    volume: 97 issue: 1 PUBMED ID: 3888974
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