tdbR00000387

NameValue
Coding AA: Ser
Anticodon sequence: 5GA
Organism: Bacillus subtilis NCBI:txid1423
RNA type: cytoplasmic
Sequence: GGAGGAA4ACCCAAGUCUGGCDGA"GGGAUCGGUCU5GA+AACCGACAGGGUGUCAAAGCCCGCGGGGGTPCGAAUCCCUCUUCCUCCGCCA
Unmodified sequence: GGAGGAAUACCCAAGUCUGGCUGAAGGGAUCGGUCUUGAAAACCGACAGGGUGUCAAAGCCCGCGGGGGUUCGAAUCCCUCUUCCUCCGCCA
Secondary structure: (((((((..(((.............))).(((((.......)))))..................(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -24.90
Pre-aligned sequence:
Pre-aligned secondary structure:
-GGAGGAA4ACCCAAGUCUGGCDGA"GGGAUCGGUCU5GA+AACCGACAGGGUG--UCAA---AGCCCG-CGGGGGTPCGAAUCCCUCUUCCUCCGCCA
.(((((((..(((.............))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Nucleotide sequences of serine tRNAs from Bacillus subtilis.
    J Matsugi, H T Jia, K Murao, H Ishikura
    Biochimica et biophysica acta
    volume: 1130 issue: 3 date: April 6, 1992 PUBMED ID: 1373329
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