tdbR00000121

NameValue
Coding AA: Gly
Anticodon sequence: NCC
Organism: Salmonella typhimurium NCBI:txid602
RNA type: cytoplasmic
Sequence: GCGGGCAUCGUAUAAUGGCUAUUACCUCAGCCUNCCAAGCUGAUGAUGCGGGTPCGAUUCCCGCUGCCCGCUCCA
Unmodified sequence: GCGGGCAUCGUAUAAUGGCUAUUACCUCAGCCUUCCAAGCUGAUGAUGCGGGUUCGAUUCCCGCUGCCCGCUCCA
Secondary structure: (((((((..(((..........))).(((((.......)))))....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -27.50
Pre-aligned sequence:
Pre-aligned secondary structure:
-GCGGGCAUCGUAUAAU--GGCU-AUUACCUCAGCCUNCCAAGCUGAUG-------------------A-UGCGGGTPCGAUUCCCGCUGCCCGCUCCA
.(((((((..(((.............))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Glycine tRNA mutants with normal anticodon loop size cause -1 frameshifting.
    D J O'Mahony, B H Mims, S Thompson, E J Murgola, J F Atkins
    Proceedings of the National Academy of Sciences of the United States of America
    volume: 86 issue: 20 PUBMED ID: 2813373
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